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Predicting miRNA-disease association through combining miRNA function and network topological similarities based on MINE

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成果类型:
期刊论文
作者:
Cao, Buwen;Li, Renfa;Xiao, Sainan;Deng, Shuguang;Zhou, Xiangjun;...
通讯作者:
Buwen Cao<&wdkj&>Renfa Li
作者机构:
[Xiao, Sainan; Zhou, Lang; Zhou, Xiangjun; Cao, Buwen; Deng, Shuguang] Hunan City Univ, Coll Informat & Elect Engn, Yiyang 413000, Peoples R China.
[Xiao, Sainan; Cao, Buwen; Li, Renfa] Hunan Univ, Coll Comp Sci & Elect Engn, Key Lab Embedded & Cyber Phys Syst, Changsha 410082, Peoples R China.
通讯机构:
[Buwen Cao; Renfa Li] C
College of Information and Electronic Engineering, Hunan City University, Yiyang 413000, China<&wdkj&>College of Computer Science and Electronic Engineering, Key Laboratory for Embedded and Cyber-Physical Systems, Hunan University, Changsha 410082, China<&wdkj&>College of Computer Science and Electronic Engineering, Key Laboratory for Embedded and Cyber-Physical Systems, Hunan University, Changsha 410082, China
语种:
英文
关键词:
Bioinformatics;Biological sciences;Computational bioinformatics
期刊:
iScience
ISSN:
2589-0042
年:
2022
卷:
25
期:
11
页码:
105299
基金类别:
National Natural Science Foundation of China [61873089, 62032007]; Key Project of the Education Department of Hunan Province [20A087]; Innovation Platform Open Fund Project of Hunan Provincial Education Department [20K025]
机构署名:
本校为第一机构
院系归属:
信息与电子工程学院
摘要:
Predicting associations between microRNAs (miRNAs) and diseases from the viewpoint of function modules has become increasingly popular. However, existing methods obtained the relations between diseases and miRNAs only through the construction of similarity networks and neglected the complex network characteristic. In this paper, a new method named combining miRNA function similarities and network topology similarities based on module identification in networks (ComSim-MINE) was developed. Combined similarity is calculated from the harmonic mean between miRNA function similarities and network t...

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