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An information entropy-based method to detect microRNA regulatory module

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成果类型:
期刊论文
作者:
Yi Yang;Yan Song;Buwen Cao
作者机构:
[Yi Yang; Yan Song] Department of Information Technology, Hunan Women's University
[Buwen Cao] College of Information and Electronic Engineering, Hunan City University
语种:
英文
关键词:
Information entropy;Ovarian cancer;microRNA regulatory module
期刊:
IPSJ Transactions on Bioinformatics
ISSN:
1882-6679
年:
2019
卷:
12
页码:
1-8
机构署名:
本校为其他机构
院系归属:
信息与电子工程学院
摘要:
The detection of miRNA regulatory modules (MRMs) can facilitate the analysis of miRNA combination effects in aberrant transcriptional regulatory networks. Existing methods suffer from stochastic or require a predetermined number of regulatory modules. We here develop a parameter-free computational framework named DeMine to predict MRMs. Briefly, DeMine is an information entropy-based method implemented by three steps. It first transforms miRNA regulatory network into a miRNA-miRNA synergistic network, and then detects miRNA clusters by maximizi...

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